Class SequenceAlignmentsDistanceMatrix

java.lang.Object
jebl.evolution.distances.BasicDistanceMatrix
jebl.evolution.align.SequenceAlignmentsDistanceMatrix
All Implemented Interfaces:
DistanceMatrix

public class SequenceAlignmentsDistanceMatrix extends BasicDistanceMatrix
Builds a distance matrix by performing a series of pairwise alignments between the specified sequences (unlike the methods in jebl.evolution.distances, which extract the pairwise distances from a multiple sequence alignment).
Version:
$Id: SequenceAlignmentsDistanceMatrix.java 1057 2010-05-24 03:20:46Z matt_kearse $
Author:
Joseph Heled