Uses of Interface
jebl.util.Attributable
Packages that use Attributable
Package
Description
-
Uses of Attributable in jebl.evolution.alignments
Classes in jebl.evolution.alignments that implement Attributable -
Uses of Attributable in jebl.evolution.graphs
Subinterfaces of Attributable in jebl.evolution.graphs -
Uses of Attributable in jebl.evolution.sequences
Subinterfaces of Attributable in jebl.evolution.sequencesClasses in jebl.evolution.sequences that implement AttributableModifier and TypeClassDescriptionclass
A default implementation of the Sequence interface.class
A default implementation of the Sequence interface that converts sequence characters to States such that calling getString() will always return uppercase residues with nucleotide U residues converted to Tclass
A codon implementation of the Sequence interface.class
class
class
-
Uses of Attributable in jebl.evolution.taxa
Classes in jebl.evolution.taxa that implement Attributable -
Uses of Attributable in jebl.evolution.trees
Subinterfaces of Attributable in jebl.evolution.treesModifier and TypeInterfaceDescriptioninterface
A tree with a root (node with maximum height).interface
A rooted or unrooted tree.Classes in jebl.evolution.trees that implement AttributableModifier and TypeClassDescriptionclass
class
Common implementation of Attributable interface used by Nodes.class
Common implementation of Attributable interface used by Nodes.class
A memory efficient rooted tree.class
class
A simple rooted tree providing some ability to manipulate the tree.final class
A rooted tree concrete class that wraps another tree and provides a differently rooted view of that tree.class
Root an unrooted tree.final class
A simple, immutable rooted tree implementation that is a subtree of an existing tree subtending a specified set of taxa..final class
A simple, and initially immutable rooted tree implementation.final class
A basic implementation on an unrooted tree.class
class
This RootedTree class wraps another RootedTree and transforms the branch lengths and node heights using various functions. -
Uses of Attributable in jebl.util
Classes in jebl.util that implement Attributable